4YOF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HEM, NO enzyme
Primary referenceDistal Hydrogen-Bonding Interactions in Ligand Sensing and Signaling by Mycobacterium tuberculosis DosS., Basudhar D, Madrona Y, Yukl ET, Sivaramakrishnan S, Nishida CR, Moenne-Loccoz P, Ortiz de Montellano PR, J Biol Chem. 2016 May 27. pii: jbc.M116.724815. PMID:27235395
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (4yof.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 4YOF
  • CSU: Contacts of Structural Units for 4YOF
  • Structure Factors (234 Kb)
  • Retrieve 4YOF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YOF from S2C, [Save to disk]
  • Re-refined 4yof structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YOF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yof] [4yof_A] [4yof_B]
  • SWISS-PROT database:
  • Domain found in 4YOF: [GAF ] by SMART

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