4YOP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, NA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Native sulfur/chlorine SAD phasing for serial femtosecond crystallography., Nakane T, Song C, Suzuki M, Nango E, Kobayashi J, Masuda T, Inoue S, Mizohata E, Nakatsu T, Tanaka T, Tanaka R, Shimamura T, Tono K, Joti Y, Kameshima T, Hatsui T, Yabashi M, Nureki O, Iwata S, Sugahara M, Acta Crystallogr D Biol Crystallogr. 2015 Dec 1;71(Pt 12):2519-25. doi:, 10.1107/S139900471501857X. Epub 2015 Nov 27. PMID:26627659

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk] Biological Unit Coordinates (4yop.pdb1.gz) 21 Kb LPC: Ligand-Protein Contacts for 4YOP CSU: Contacts of Structural Units for 4YOP Structure Factors (132 Kb) Retrieve 4YOP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4YOP from S2C, [Save to disk] Re-refined 4yop structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YOP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4yop] [4yop_A] SWISS-PROT database: Domain found in 4YOP: [LYZ1 ] by SMART

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