4YRF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 4HS, DMS, EDO, HIS, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA binding hotspot in Trypanosoma cruzi histidyl-tRNA synthetase revealed by fragment-based crystallographic cocktail screens., Koh CY, Kallur Siddaramaiah L, Ranade RM, Nguyen J, Jian T, Zhang Z, Gillespie JR, Buckner FS, Verlinde CL, Fan E, Hol WG, Acta Crystallogr D Biol Crystallogr. 2015 Aug 1;71(Pt 8):1684-98. doi:, 10.1107/S1399004715007683. Epub 2015 Jul 31. PMID:26249349
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk]
  • Biological Unit Coordinates (4yrf.pdb1.gz) 267 Kb
  • LPC: Ligand-Protein Contacts for 4YRF
  • CSU: Contacts of Structural Units for 4YRF
  • Structure Factors (1324 Kb)
  • Retrieve 4YRF in mmCIF format [Save to disk]
  • Re-refined 4yrf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YRF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yrf] [4yrf_A]
  • SWISS-PROT database:

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