4YWG date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
G, Q


Primary referenceThe V1V2 Region of HIV-1 gp120 Forms a Five-Stranded Beta Barrel., Pan R, Gorny MK, Zolla-Pazner S, Kong XP, J Virol. 2015 Aug 1;89(15):8003-10. doi: 10.1128/JVI.00754-15. Epub 2015 May 27. PMID:26018158
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk]
  • Biological Unit Coordinates (4ywg.pdb1.gz) 83 Kb
  • Biological Unit Coordinates (4ywg.pdb2.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 4YWG
  • CSU: Contacts of Structural Units for 4YWG
  • Structure Factors (575 Kb)
  • Retrieve 4YWG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YWG from S2C, [Save to disk]
  • Re-refined 4ywg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YWG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ywg] [4ywg_G] [4ywg_H] [4ywg_I] [4ywg_L] [4ywg_M] [4ywg_Q]
  • SWISS-PROT database:
  • Domains found in 4YWG: [IG_like] [IGv ] by SMART

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