4YYP Crystal structure of human PLK4-PB3 in complex with STIL-CC date
authors Imseng, S., Arquint, C., Gabryjonczyk, A., Boehm, R., Sauer, E., Hiller, S., Nigg, E.A., Maier, T.
compound source
symmetry
R_factor
R_Free 0.2542
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand CL enzyme
Primary referenceSTIL binding to Polo-box 3 of PLK4 regulates centriole duplication., Arquint C, Gabryjonczyk AM, Imseng S, Bohm R, Sauer E, Hiller S, Nigg EA, Maier T, Elife. 2015 Jul 18;4. doi: 10.7554/eLife.07888. PMID:26188084
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (4yyp.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 4YYP
  • CSU: Contacts of Structural Units for 4YYP
  • Structure Factors (148 Kb)
  • Retrieve 4YYP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YYP from S2C, [Save to disk]
  • Re-refined 4yyp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YYP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4YYP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yyp] [4yyp_B] [4yyp_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4YYP
  • Community annotation for 4YYP at PDBWiki (http://pdbwiki.org)

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