4Z11 Latent aurone synthase (polyphenol oxidase) from natural source date
authors Molitor, C., Mauracher, S.G., Rompel, A.
compound source
symmetry
R_factor
R_Free 0.2344
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand CU enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceAurone synthase is a catechol oxidase with hydroxylase activity and provides insights into the mechanism of plant polyphenol oxidases., Molitor C, Mauracher SG, Rompel A, Proc Natl Acad Sci U S A. 2016 Mar 29;113(13):E1806-15. doi:, 10.1073/pnas.1523575113. Epub 2016 Mar 14. PMID:26976571
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (937 Kb) [Save to disk]
  • Biological Unit Coordinates (4z11.pdb1.gz) 238 Kb
  • Biological Unit Coordinates (4z11.pdb2.gz) 230 Kb
  • Biological Unit Coordinates (4z11.pdb3.gz) 238 Kb
  • Biological Unit Coordinates (4z11.pdb4.gz) 233 Kb
  • LPC: Ligand-Protein Contacts for 4Z11
  • CSU: Contacts of Structural Units for 4Z11
  • Structure Factors (1345 Kb)
  • Retrieve 4Z11 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Z11 from S2C, [Save to disk]
  • Re-refined 4z11 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4Z11 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4Z11
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4z11] [4z11_A] [4z11_D] [4z11_C] [4z11_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4Z11
  • Community annotation for 4Z11 at PDBWiki (http://pdbwiki.org)

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