4Z47 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACY, EDO, ORP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA., Malik SS, Coey CT, Varney KM, Pozharski E, Drohat AC, Nucleic Acids Res. 2015 Sep 10. pii: gkv890. PMID:26358812
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (4z47.pdb1.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 4Z47
  • CSU: Contacts of Structural Units for 4Z47
  • Structure Factors (3567 Kb)
  • Retrieve 4Z47 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Z47 from S2C, [Save to disk]
  • Re-refined 4z47 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Z47 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4z47] [4z47_A] [4z47_C] [4z47_D]
  • SWISS-PROT database:
  • Domains found in 4Z47: [UDG] [UreE_C ] by SMART

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