4Z7H Crystal structure of human IRE1 cytoplasmic kinase-RNase region - complex with imidazopyridine compound 3 date
authors Joshi, A., Bayliss, R.
compound source
symmetry
R_factor
R_Free 0.2248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.90
ligand 4L5, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMolecular mechanisms of human IRE1 activation through dimerization and ligand binding., Joshi A, Newbatt Y, McAndrew PC, Stubbs M, Burke R, Richards MW, Bhatia C, Caldwell JJ, McHardy T, Collins I, Bayliss R, Oncotarget. 2015 Apr 18. PMID:25968568
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (268 Kb) [Save to disk]
  • Biological Unit Coordinates (4z7h.pdb1.gz) 131 Kb
  • Biological Unit Coordinates (4z7h.pdb2.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 4Z7H
  • CSU: Contacts of Structural Units for 4Z7H
  • Structure Factors (1314 Kb)
  • Retrieve 4Z7H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Z7H from S2C, [Save to disk]
  • Re-refined 4z7h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4Z7H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4Z7H
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4Z7H, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4z7h] [4z7h_B] [4z7h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4Z7H: [PUG] [STYKc ] by SMART
    • Other resources with information on 4Z7H
  • Community annotation for 4Z7H at PDBWiki (http://pdbwiki.org)

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