4ZKA Rna Binding Protein date Apr 30, 2015
title High Resolution Crystal Structure Of Fox1 Rrm
authors M.Blatter, F.H.T.Allain
compound source
Molecule: Rna Binding Protein Fox-1 Homolog 1
Chain: A, B, C, D, E, F
Fragment: Unp Residues 109-208
Synonym: Ataxin-2-Binding Protein 1,Fox-1 Homolog A, Hexaribonucleotide-Binding Protein 1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rbfox1, A2bp, A2bp1, Fox1, Hrnbp1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_plasmid: Ptyb11
symmetry Space Group: C 1 2 1
R_factor 0.194 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.980 77.617 106.386 90.00 93.99 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand MES, PG4, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (263 Kb) [Save to disk]
  • Biological Unit Coordinates (4zka.pdb1.gz) 46 Kb
  • Biological Unit Coordinates (4zka.pdb2.gz) 45 Kb
  • Biological Unit Coordinates (4zka.pdb3.gz) 44 Kb
  • Biological Unit Coordinates (4zka.pdb4.gz) 45 Kb
  • Biological Unit Coordinates (4zka.pdb5.gz) 44 Kb
  • Biological Unit Coordinates (4zka.pdb6.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 4ZKA
  • CSU: Contacts of Structural Units for 4ZKA
  • Structure Factors (718 Kb)
  • Retrieve 4ZKA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZKA from S2C, [Save to disk]
  • Re-refined 4zka structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZKA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZKA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 4zka from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zka_E] [4zka_B] [4zka_C] [4zka_F] [4zka_A] [4zka] [4zka_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4ZKA: [RRM ] by SMART
  • Other resources with information on 4ZKA
  • Community annotation for 4ZKA at PDBWiki (http://pdbwiki.org)

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