4ZNE Immune System date May 04, 2015
title Igg1 Fc-Fcgammari Ecd Complex
authors V.Y.Oganesyan, W.F.Dall'Acqua
compound source
Molecule: High Affinity Immunoglobulin Gamma Fc Receptor I
Chain: A
Fragment: Unp Residues 16-282
Synonym: Igg Fc Receptor I,Fc-Gamma Ri,Fcri,Fc-Gamma Ria,Fc
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fcgr1a, Fcg1, Fcgr1, Igfr1
Expression_system: Mammalian Expression Vector Pck146
Expression_system_taxid: 943932

Molecule: Ig Gamma-1 Chain C Region
Chain: E, J
Fragment: Unp Residues 104-330
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ighg1
Expression_system: Mammalian Expression Vector Pbgsa
Expression_system_taxid: 285261
symmetry Space Group: C 1 2 1
R_factor 0.201 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
134.735 126.750 71.844 90.00 118.44 90.00
method X-Ray Diffractionresolution 2.42 Å
ligand FUL, MAN, NAG, ZN enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (4zne.pdb1.gz) 118 Kb
  • LPC: Ligand-Protein Contacts for 4ZNE
  • CSU: Contacts of Structural Units for 4ZNE
  • Structure Factors (2139 Kb)
  • Retrieve 4ZNE in mmCIF format [Save to disk]
  • Re-refined 4zne structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZNE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZNE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 4zne from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zne] [4zne_E] [4zne_A] [4zne_J]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4ZNE: [IG_like] [IGc1] [IGc2 ] by SMART
  • Other resources with information on 4ZNE
  • Community annotation for 4ZNE at PDBWiki (http://pdbwiki.org)

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