4ZNR Crystal structure of Dln1 complexed with Man(alpha1-3)Man date
authors Jia, N., Jiang, Y.L., Cheng, W., Wang, H.W., Zhou, C.Z., Chen, Y.
compound source
symmetry
R_factor
R_Free 0.24114
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand 1PE, CL, EDO, EPE, MAN, PEG, PG4, PGE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis for receptor recognition and pore formation of a zebrafish aerolysin-like protein., Jia N, Liu N, Cheng W, Jiang YL, Sun H, Chen LL, Peng J, Zhang Y, Ding YH, Zhang ZH, Wang X, Cai G, Wang J, Dong MQ, Zhang Z, Wu H, Wang HW, Chen Y, Zhou CZ, EMBO Rep. 2015 Dec 28. pii: e201540851. PMID:26711430
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk]
  • Biological Unit Coordinates (4znr.pdb1.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 4ZNR
  • CSU: Contacts of Structural Units for 4ZNR
  • Structure Factors (1092 Kb)
  • Retrieve 4ZNR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZNR from S2C, [Save to disk]
  • Re-refined 4znr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4ZNR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4ZNR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4znr] [4znr_B] [4znr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4ZNR
  • Community annotation for 4ZNR at PDBWiki (http://pdbwiki.org)

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