4ZP2 Crystal structure of E. coli multidrug transporter MdfA in complex with n-dodecyl-N,N-dimethylamine-N-oxide date
authors Zhang, X.C., Heng, J., Zhao, Y., Wang, X.
compound source
symmetry
R_factor
R_Free 0.2319
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand LDA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • sodium:proton antiporter act...
  • potassium:proton antiporter ...


    • Primary referenceSubstrate-bound structure of the E. coli multidrug resistance transporter MdfA., Heng J, Zhao Y, Liu M, Liu Y, Fan J, Wang X, Zhao Y, Zhang XC, Cell Res. 2015 Aug 4. doi: 10.1038/cr.2015.94. PMID:26238402
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (4zp2.pdb1.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 4ZP2
  • CSU: Contacts of Structural Units for 4ZP2
  • Structure Factors (313 Kb)
  • Retrieve 4ZP2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4ZP2 from S2C, [Save to disk]
  • Re-refined 4zp2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZP2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZP2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zp2] [4zp2_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ZP2
  • Community annotation for 4ZP2 at PDBWiki (http://pdbwiki.org)

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