4ZSM BACE crystal structure with bicyclic aminothiazine fragment date
authors Timm, D.E.
compound source
symmetry
R_factor
R_Free 0.25761
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.96
ligand 4RW, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePreparation and biological evaluation of conformationally constrained BACE1 inhibitors., Winneroski LL, Schiffler MA, Erickson JA, May PC, Monk SA, Timm DE, Audia JE, Beck JP, Boggs LN, Borders AR, Boyer RD, Brier RA, Hudziak KJ, Klimkowski VJ, Garcia Losada P, Mathes BM, Stout SL, Watson BM, Mergott DJ, Bioorg Med Chem. 2015 Jul 1;23(13):3260-8. doi: 10.1016/j.bmc.2015.04.062. Epub, 2015 May 6. PMID:26001341
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]
  • Biological Unit Coordinates (4zsm.pdb1.gz) 70 Kb
  • Biological Unit Coordinates (4zsm.pdb2.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 4ZSM
  • CSU: Contacts of Structural Units for 4ZSM
  • Structure Factors (4074 Kb)
  • Retrieve 4ZSM in mmCIF format [Save to disk]
  • Re-refined 4zsm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4ZSM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4ZSM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4ZSM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4zsm] [4zsm_A] [4zsm_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4ZSM
  • Community annotation for 4ZSM at PDBWiki (http://pdbwiki.org)

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