4BDS Hydrolase date Oct 06, 2012
title Human Butyrylcholinesterase In Complex With Tacrine
authors F.Nachon, E.Carletti, C.Ronco, M.Trovaslet, Y.Nicolet, L.Jean, P.
compound source
Molecule: Cholinesterase
Chain: A
Fragment: Catalytic Domain, Residues 29-557
Synonym: Butyrylcholinesterase, Acylcholine Acylhydrolase, Butyrylcholine Esterase, Choline Esterase II, Pseudocholine
Ec: 3.1.1.8
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell_line: Cho-K1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgs
symmetry Space Group: I 4 2 2
R_factor 0.176 R_Free 0.209
crystal
cell
length a length b length c angle alpha angle beta angle gamma
155.660 155.660 127.880 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand CL, FPK, FUC, FUL, GOL, NAG, SO4, THA, UNX enzyme Hydrolase E.C.3.1.1.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal Structures of Human Cholinesterases in Complex with Huprine W and Tacrine: Elements of Specificity for Anti-Alzheimer's Drugs Targeting Acetyl- and Butyrylcholinesterase., Nachon F, Carletti E, Ronco C, Trovaslet M, Nicolet Y, Jean L, Renard PY, Biochem J. 2013 May 17. PMID:23679855
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk]
  • Biological Unit Coordinates (4bds.pdb1.gz) 184 Kb
  • LPC: Ligand-Protein Contacts for 4BDS
  • CSU: Contacts of Structural Units for 4BDS
  • Structure Factors (754 Kb)
  • Retrieve 4BDS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BDS from S2C, [Save to disk]
  • Re-refined 4bds structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BDS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BDS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4BDS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bds] [4bds_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4BDS
  • Community annotation for 4BDS at PDBWiki (http://pdbwiki.org)

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