4OXK Multiple binding modes of inhibitor PT155 to the Mycobacterium tuberculosis enoyl-ACP reductase InhA within a tetramer date
authors Li, H.J., Pan, P., Lai, C.T., Liu, N., Garcia-Diaz, M., Simmerling, C., Tonge, P.J.
compound source
symmetry
R_factor
R_Free 0.1770
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.84
ligand 1S5, 2NV, NAD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceA Structural and Energetic Model for the Slow-Onset Inhibition of the Mycobacterium tuberculosis Enoyl-ACP Reductase InhA., Li HJ, Lai CT, Pan P, Yu W, Liu N, Bommineni GR, Garcia-Diaz M, Simmerling C, Tonge PJ, ACS Chem Biol. 2014 Apr 18;9(4):986-93. doi: 10.1021/cb400896g. Epub 2014 Mar 10. PMID:24527857
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (362 Kb) [Save to disk]
  • Biological Unit Coordinates (4oxk.pdb1.gz) 355 Kb
  • LPC: Ligand-Protein Contacts for 4OXK
  • CSU: Contacts of Structural Units for 4OXK
  • Structure Factors (1358 Kb)
  • Retrieve 4OXK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OXK from S2C, [Save to disk]
  • Re-refined 4oxk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4OXK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4OXK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OXK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4oxk_C] [4oxk_A] [4oxk] [4oxk_D] [4oxk_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4OXK
  • Community annotation for 4OXK at PDBWiki (http://pdbwiki.org)

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