5A19 The structure of MAT2A in complex with PPNP. date
authors Murray, B., Antonyuk, S.V., Marina, A., Lu, S.C., Mato, J.M., Hasnain, S.S., Rojas, A.L.
compound source
symmetry
R_factor
R_Free 0.20446
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.34
ligand EDO, K, MG, PEG, PG4, PPK enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystallography captures catalytic steps in human methionine adenosyltransferase enzymes., Murray B, Antonyuk SV, Marina A, Lu SC, Mato JM, Hasnain SS, Rojas AL, Proc Natl Acad Sci U S A. 2016 Feb 8. pii: 201510959. PMID:26858410
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (5a19.pdb1.gz) 121 Kb
  • LPC: Ligand-Protein Contacts for 5A19
  • CSU: Contacts of Structural Units for 5A19
  • Structure Factors (310 Kb)
  • Retrieve 5A19 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A19 from S2C, [Save to disk]
  • Re-refined 5a19 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5A19 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5A19
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a19] [5a19_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5A19
  • Community annotation for 5A19 at PDBWiki (http://pdbwiki.org)

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