5A2V Crystal structure of mtPAP in Apo form date
authors Lapkouski, M., Hallberg, B.M.
compound source
symmetry
R_factor
R_Free 0.24532
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.82
ligand CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of mitochondrial poly(A) RNA polymerase reveals the structural basis for dimerization, ATP selectivity and the SPAX4 disease phenotype., Lapkouski M, Hallberg BM, Nucleic Acids Res. 2015 Aug 28. pii: gkv861. PMID:26319014
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (170 Kb) [Save to disk]
  • Biological Unit Coordinates (5a2v.pdb1.gz) 164 Kb
  • LPC: Ligand-Protein Contacts for 5A2V
  • CSU: Contacts of Structural Units for 5A2V
  • Structure Factors (5350 Kb)
  • Retrieve 5A2V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A2V from S2C, [Save to disk]
  • Re-refined 5a2v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5A2V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5A2V
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a2v] [5a2v_B] [5a2v_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5A2V
  • Community annotation for 5A2V at PDBWiki (http://pdbwiki.org)

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