5A4T DYRK1A IN COMPLEX WITH NITRILE BENZOTHIAZOLE FRAGMENT date
authors Rothweiler, U.
compound source
symmetry
R_factor
R_Free 0.23430
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.15
ligand AJG, PTR enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceProbing the ATP-Binding Pocket of Protein Kinase DYRK1A with Benzothiazole Fragment Molecules., Rothweiler U, Stensen W, Brandsdal BO, Isaksson J, Leeson FA, Engh RA, Svendsen JS, J Med Chem. 2016 Nov 10;59(21):9814-9824. Epub 2016 Oct 21. PMID:27736065
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (227 Kb) [Save to disk]
  • Biological Unit Coordinates (5a4t.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (5a4t.pdb2.gz) 58 Kb
  • Biological Unit Coordinates (5a4t.pdb3.gz) 56 Kb
  • Biological Unit Coordinates (5a4t.pdb4.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 5A4T
  • CSU: Contacts of Structural Units for 5A4T
  • Structure Factors (1954 Kb)
  • Retrieve 5A4T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A4T from S2C, [Save to disk]
  • Re-refined 5a4t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5A4T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5A4T
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a4t_D] [5a4t] [5a4t_C] [5a4t_B] [5a4t_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5A4T: [S_TKc ] by SMART
    • Other resources with information on 5A4T
  • Community annotation for 5A4T at PDBWiki (http://pdbwiki.org)

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