5A5K AtGSTF2 from Arabidopsis thaliana in complex with camalexin date
authors Ahmad, L., Rylott, E., Bruce, N.C., Edwards, R., Grogan, G.
compound source
symmetry
R_factor
R_Free 0.28428
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.77
ligand 7WB enzyme
Gene
Ontology
ChainFunctionProcessComponent
S, F, T, N, K, E, V, Q, M, C, L, A, J, O, W, X, P, B, H, D, R, I, G, U
  • peroxidase activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (780 Kb) [Save to disk]
  • Biological Unit Coordinates (5a5k.pdb1.gz) 199 Kb
  • Biological Unit Coordinates (5a5k.pdb2.gz) 204 Kb
  • Biological Unit Coordinates (5a5k.pdb3.gz) 200 Kb
  • Biological Unit Coordinates (5a5k.pdb4.gz) 195 Kb
  • LPC: Ligand-Protein Contacts for 5A5K
  • CSU: Contacts of Structural Units for 5A5K
  • Structure Factors (6770 Kb)
  • Retrieve 5A5K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A5K from S2C, [Save to disk]
  • Re-refined 5a5k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5A5K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5A5K
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a5k_T] [5a5k_H] [5a5k_X] [5a5k_E] [5a5k_C] [5a5k_W] [5a5k_D] [5a5k_A] [5a5k_J] [5a5k_I] [5a5k_V] [5a5k_M] [5a5k_B] [5a5k_S] [5a5k_G] [5a5k_L] [5a5k_Q] [5a5k_K] [5a5k] [5a5k_R] [5a5k_P] [5a5k_O] [5a5k_U] [5a5k_N] [5a5k_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5A5K
  • Community annotation for 5A5K at PDBWiki (http://pdbwiki.org)

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