5A6Y date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, GOL, MAN, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, B, D, A


Primary referenceThe virulence factor LecB varies in clinical isolates: consequences for ligand binding and drug discovery., Sommer R, Wagner S, Varrot A, Nycholat CM, Khaledi A, Haussler S, Paulson JC, Imberty A, Titz A, Chem Sci. 2016 Aug 1;7(8):4990-5001. doi: 10.1039/c6sc00696e. Epub 2016 May 11. PMID:30155149
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk]
  • Biological Unit Coordinates (5a6y.pdb1.gz) 157 Kb
  • LPC: Ligand-Protein Contacts for 5A6Y
  • CSU: Contacts of Structural Units for 5A6Y
  • Structure Factors (2233 Kb)
  • Retrieve 5A6Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A6Y from S2C, [Save to disk]
  • Re-refined 5a6y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5A6Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a6y_D] [5a6y] [5a6y_A] [5a6y_B] [5a6y_C]
  • SWISS-PROT database:

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