5A93 293K Joint X-ray Neutron with Cefotaxime: EXPLORING THE MECHANISM OF BETA-LACTAM RING PROTONATION IN THE CLASS A BETA-LACTAMASE ACYLATION MECHANISM USING NEUTRON AND X-RAY CRYSTALLOGRAPHY date
authors Vandavasi, V.G., Weiss, K.L., Cooper, J.B., Erskine, P.T., Tomanicek, S.J., Ostermann, A., Schrader, T.E., Ginell, S.L., Coates, L.
compound source
symmetry
R_factor
R_Free 0.1562
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand CEF, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceExploring the Mechanism of beta-Lactam Ring Protonation in the Class A beta-lactamase Acylation Mechanism Using Neutron and X-ray Crystallography., Vandavasi VG, Weiss KL, Cooper JB, Erskine PT, Tomanicek SJ, Ostermann A, Schrader TE, Ginell SL, Coates L, J Med Chem. 2015 Dec 2. PMID:26630115
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (5a93.pdb1.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 5A93
  • CSU: Contacts of Structural Units for 5A93
  • Structure Factors (279 Kb)
  • Retrieve 5A93 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5A93 from S2C, [Save to disk]
  • Re-refined 5a93 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Visual 3D analysis of 5A93
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  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5a93 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5a93] [5a93_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5A93
  • Community annotation for 5A93 at PDBWiki (http://pdbwiki.org)

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