5A9Q	Human nuclear pore complex	date
authors	Appen, A.von., Kosinski, J., Sparks, L., Ori, A., DiGuilio, A., Vollmer, B., Mackmull, M., Banterle, N., Parca, L., Kastritis, P., Buczak, K., Mosalaganti, S., Hagen, W., Andres-Pons, A., Lemke, E.A., Bork, P., Antonin, W., Glavy, J.S., Bui, K.H., Beck, M.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	23.00
Gene Ontology	Chain Function Process Component 7, Y, G, P intracellular transport of v... B, A intracellular transport of v... D, V, M, 4 intracellular transport of v... F, 6, O, X COPII vesicle coating intracellular transport of v... cargo loading into COPII-coa... COPII-coated vesicle budding... I, 0, 9, R intracellular transport of v... N, E, W, 5 S, a, 1, J intracellular transport of v... T, K, 2, b intracellular transport of v... U, C, L, 3 intracellular transport of v... Z, H, Q, 8 intracellular transport of v...
Primary reference	In situ structural analysis of the human nuclear pore complex., von Appen A, Kosinski J, Sparks L, Ori A, DiGuilio AL, Vollmer B, Mackmull MT, Banterle N, Parca L, Kastritis P, Buczak K, Mosalaganti S, Hagen W, Andres-Pons A, Lemke EA, Bork P, Antonin W, Glavy JS, Bui KH, Beck M, Nature. 2015 Oct 1;526(7571):140-3. doi: 10.1038/nature15381. Epub 2015 Sep 23. PMID:26416747

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1815 Kb) [Save to disk] Biological Unit Coordinates (5a9q.pdb1.gz) 12932 Kb CSU: Contacts of Structural Units for 5A9Q Retrieve 5A9Q in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5A9Q from S2C, [Save to disk]

View 5A9Q in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5A9Q

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5a9q_8] [5a9q_a] [5a9q_M] [5a9q_G] [5a9q_3] [5a9q_T] [5a9q_F] [5a9q_X] [5a9q_H] [5a9q_I] [5a9q_O] [5a9q_U] [5a9q_6] [5a9q_P] [5a9q_b] [5a9q_Z] [5a9q_Q] [5a9q_2] [5a9q_1] [5a9q_7] [5a9q_R] [5a9q_Y] [5a9q_4] [5a9q] [5a9q_C] [5a9q_5] [5a9q_L] [5a9q_V] [5a9q_A] [5a9q_D] [5a9q_B] [5a9q_9] [5a9q_J] [5a9q_N] [5a9q_S] [5a9q_0] [5a9q_K] [5a9q_E] [5a9q_W] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5A9Q: [WD40 ] by SMART

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