5AAZ Protein Binding date Jul 31, 2015
title Tbk1 Recruitment To Cytosol-Invading Salmonella Induces Anti-Bacterial Autophagy
authors T.L.Thurston, M.D.Allen, B.Ravenhill, M.Karpiyevitch, S.Bloor, A. S.Matthews, D.Komander, D.Holden, M.Bycroft, F.Randow
compound source
Molecule: Optineurin
Chain: A
Fragment: Resides 548-577
Synonym: E3-14.7k-Interacting Protein, Fip-2, Huntingtin Ye Partner L, Huntingtin-Interacting Protein 7, Hip-7, Huntingtin-Interacting Protein L, Nemo-Related Protein, Op Neuropathy-Inducing Protein, Transcription Factor Iiia-Int Protein, Tfiiia-Intp;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: C41
Expression_system_plasmid: Hltv Plasmid
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (5aaz.pdb1.gz) 9 Kb
  • LPC: Ligand-Protein Contacts for 5AAZ
  • CSU: Contacts of Structural Units for 5AAZ
  • Original NMR restraints for 5AAZ from PDB
  • Retrieve 5AAZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AAZ from S2C, [Save to disk]
  • View 5AAZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5AAZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5aaz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5aaz_A] [5aaz]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5AAZ
  • Community annotation for 5AAZ at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science