5AGK Structure of rat neuronal nitric oxide synthase heme domain in complex with (2S)-2-Amino-5-(2-(methylsulfinyl)acetimidamido) pentanoic acid date
authors Li, H., Poulos, T.L.
compound source
symmetry
R_factor
R_Free 0.2155
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand ACT, H4B, HEM, RGE, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMechanism of Inactivation of Neuronal Nitric Oxide Synthase by (S)-2-Amino-5-(2-(methylthio)acetimidamido)pentanoic acid., Tang W, Li H, Doud EH, Chen Y, Choing S, Plaza C, Kelleher NL, Poulos TL, Silverman RB, J Am Chem Soc. 2015 Apr 15. PMID:25874809
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (303 Kb) [Save to disk]
  • Biological Unit Coordinates (5agk.pdb1.gz) 296 Kb
  • LPC: Ligand-Protein Contacts for 5AGK
  • CSU: Contacts of Structural Units for 5AGK
  • Structure Factors (879 Kb)
  • Retrieve 5AGK in mmCIF format [Save to disk]
  • Re-refined 5agk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5AGK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5AGK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 5AGK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5agk_A] [5agk] [5agk_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5AGK
  • Community annotation for 5AGK at PDBWiki (http://pdbwiki.org)

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