5AR2	Transferase	date	Sep 23, 2015
title	Rip2 Kinase Catalytic Domain (1 - 310)
authors	A.K.Charnley, M.A.Convery, A.Lakdawala Shah, E.Jones, P.Hardwick A.Bridges, B.J.Votta, P.J.Gough, R.W.Marquis, J.Bertin, L.Casill
compound		source
Molecule: Receptor-Interacting Serinethreonine-Protein Kin Chain: A, B Fragment: Kinase Domain, Unp Residues 1-310 Synonym: Card-Containing Interleukin-1 Beta-Converting Enzy Associated Kinase, Card-Containing Il-1 Beta Ice-Kinase, R Interacting Clarp Kinase, Receptor-Interacting Protein 2, Tyrosine-Protein Kinase Ripk2, Receptor-Interacting Serine Threonine- Protein Kinase 2; Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 32 2 1	R_factor 0.16983 R_Free 0.21125
crystal cell	length a length b length c angle alpha angle beta angle gamma 132.566 132.566 107.788 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.44 Å
ligand	CA	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structures of human RIP2 kinase catalytic domain complexed with ATP-competitive inhibitors: Foundations for understanding inhibitor selectivity., Charnley AK, Convery MA, Lakdawala Shah A, Jones E, Hardwicke P, Bridges A, Ouellette M, Totoritis R, Schwartz B, King BW, Wisnoski DD, Kang J, Eidam PM, Votta BJ, Gough PJ, Marquis RW, Bertin J, Casillas L, Bioorg Med Chem. 2015 Sep 25. pii: S0968-0896(15)30063-8. doi:, 10.1016/j.bmc.2015.09.038. PMID:26455654

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk] Biological Unit Coordinates (5ar2.pdb1.gz) 102 Kb LPC: Ligand-Protein Contacts for 5AR2 CSU: Contacts of Structural Units for 5AR2 Structure Factors (753 Kb) Retrieve 5AR2 in mmCIF format [Save to disk] Re-refined 5ar2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5AR2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5AR2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ar2] [5ar2_A] [5ar2_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5AR2: [STYKc ] by SMART

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