5ARI	Hydrolase	date	Sep 24, 2015
title	Bovine Mitochondrial Atp Synthase State 2b
authors	A.Zhou, A.Rohou, D.G.Schep, J.V.Bason, M.G.Montgomery, J.E.Walker N.Grigorieff, J.L.Rubinstein
compound		source
Molecule: Atp Synthase Subunit Alpha, Mitochondrial Chain: A, B, C Fragment: Unp Residues 44-553		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria
Molecule: Atp Synthase Subunit Beta, Mitochondrial Chain: D, E, F Fragment: Unp Residues 47-528 Ec: 3.6.3.14		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria
Molecule: Atp Synthase Subunit Gamma, Mitochondrial Chain: G Fragment: Unp Residues 26-298 Synonym: F-Atpase Gamma Subunit		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria
Molecule: Atp Synthase Subunit Delta, Mitochondrial Chain: H Fragment: Unp Residues 23-168 Synonym: F-Atpase Delta Subunit		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria
Molecule: Atp Synthase Subunit Epsilon, Mitochondrial Chain: I Fragment: Unp Residues 2-51 Synonym: Atpase Subunit Epsilon		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria
Molecule: Atp Synthase F(0) Complex Subunit C1, Mitochondri Chain: J, K, L, M, N, O, P, Q Fragment: Unp Residues 63-134 Synonym: Atp Synthase Lipid-Binding Protein, Atp Synthase P P1, Atpase Protein 9, Atpase Subunit C;		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria
Molecule: Atp Synthase Subunit O, Mitochondrial Chain: S Fragment: Unp Residues 24-213 Synonym: Oligomycin Sensitivity Conferral Protein, Oscp Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pmw7
Molecule: Atp Synthase F(0) Complex Subunit B1, Mitochondri Chain: T Fragment: Unp Residues 76-249 Synonym: Atp Synthase Subunit B, Atpase Subunit B Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: C41 Expression_system_vector_type: Plasmid Expression_system_vector: Prun
Molecule: Atp Synthase Subunit D, Mitochondrial Chain: U Fragment: Unp Residues 2-125 Synonym: Atpase Subunit D Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: C41 Expression_system_vector_type: Plasmid Expression_system_vector: Prun
Molecule: Atp Synthase-Coupling Factor 6, Mitochondrial Chain: V Fragment: Unp Residues 32-108 Synonym: Atpase Subunit F6 Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: C41 Expression_system_vector_type: Plasmid Expression_system_vector: Prun
Molecule: Atp Synthase Subunit Beta, Mitochondrial Chain: W Fragment: Unp Residues 10-226		Organism_scientific: Bos Taurus Organism_common: Cow Organism_taxid: 9913 Organ: Heart Organelle: Mitochondria
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	7.40 Å
ligand		enzyme	Hydrolase E.C.3.6.3.14 BRENDA
Gene Ontology	Chain Function Process Component C, A, B F, E, D G H I N, K, Q, M, L, J, O, P S T U V W
Primary reference	Structure and conformational states of the bovine mitochondrial ATP synthase by cryo-EM., Zhou A, Rohou A, Schep DG, Bason JV, Montgomery MG, Walker JE, Grigorieff N, Rubinstein JL, Elife. 2015 Oct 6;4. doi: 10.7554/eLife.10180. PMID:26439008

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (349 Kb) [Save to disk] Biological Unit Coordinates (5ari.pdb1.gz) 320 Kb CSU: Contacts of Structural Units for 5ARI Retrieve 5ARI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5ARI from S2C, [Save to disk]

View 5ARI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5ARI

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ari_G] [5ari_N] [5ari_U] [5ari_Q] [5ari_I] [5ari_A] [5ari_P] [5ari_B] [5ari_K] [5ari_O] [5ari_V] [5ari_H] [5ari_E] [5ari_S] [5ari_C] [5ari_F] [5ari_J] [5ari_W] [5ari] [5ari_T] [5ari_M] [5ari_D] [5ari_L] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5ARI: [AAA ] by SMART

Other resources with information on 5ARI

Community annotation for 5ARI at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---