5AVM		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SO4	enzyme
Gene Ontology	Chain Function Process Component G, F, B, C, H, A, E, D
Primary reference	Crystal structures and ligand binding of PurM proteins from Thermus thermophilus and Geobacillus kaustophilus., Kanagawa M, Baba S, Watanabe Y, Nakagawa N, Ebihara A, Kuramitsu S, Yokoyama S, Sampei GI, Kawai G, J Biochem. 2015 Oct 29. pii: mvv107. PMID:26515187

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (377 Kb) [Save to disk] Biological Unit Coordinates (5avm.pdb1.gz) 96 Kb Biological Unit Coordinates (5avm.pdb2.gz) 98 Kb Biological Unit Coordinates (5avm.pdb3.gz) 97 Kb Biological Unit Coordinates (5avm.pdb4.gz) 95 Kb LPC: Ligand-Protein Contacts for 5AVM CSU: Contacts of Structural Units for 5AVM Structure Factors (1561 Kb) Retrieve 5AVM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5AVM from S2C, [Save to disk] Re-refined 5avm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5AVM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5avm] [5avm_A] [5avm_B] [5avm_C] [5avm_D] [5avm_E] [5avm_F] [5avm_G] [5avm_H] SWISS-PROT database:

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