5AWD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, IDQ, MAN, NAG	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structure-Based Design of Human TLR8-Specific Agonists with Augmented Potency and Adjuvanticity., Beesu M, Caruso G, Salyer AC, Khetani KK, Sil D, Weerasinghe M, Tanji H, Ohto U, Shimizu T, David SA, J Med Chem. 2015 Oct 8;58(19):7833-49. doi: 10.1021/acs.jmedchem.5b01087. Epub, 2015 Sep 22. PMID:26351878

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk] Biological Unit Coordinates (5awd.pdb1.gz) 259 Kb LPC: Ligand-Protein Contacts for 5AWD CSU: Contacts of Structural Units for 5AWD Structure Factors (1139 Kb) Retrieve 5AWD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5AWD from S2C, [Save to disk] Re-refined 5awd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5AWD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5awd] [5awd_A] SWISS-PROT database: Domains found in 5AWD: [LRR] [LRRCT] [LRR_TYP ] by SMART

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