5BXF Protein Binding Immune System date Jun 08, 2015
title Apo Fcrn Structure At Ph 4.5
authors H.J.Nam, M.Taha
compound source
Molecule: Igg Receptor Fcrn Large Subunit P51
Chain: A, C
Synonym: Fcrn,Igg Fc Fragment Receptor Transporter Alpha Ch Neonatal Fc Receptor;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fcgrt, Fcrn
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469

Molecule: Beta-2-Microglobulin
Chain: B, D
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: B2m, Cdabp0092, Hdcma22p
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: P 1 21 1
R_factor 0.237 R_Free 0.314
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.183 77.583 140.546 90.00 93.60 90.00
method X-Ray Diffractionresolution 2.85 Å
Gene
Ontology
ChainFunctionProcessComponent
D, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (5bxf.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (5bxf.pdb2.gz) 60 Kb
  • CSU: Contacts of Structural Units for 5BXF
  • Structure Factors (419 Kb)
  • Retrieve 5BXF in mmCIF format [Save to disk]
  • Re-refined 5bxf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5BXF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5BXF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5bxf] [5bxf_B] [5bxf_A] [5bxf_D] [5bxf_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5BXF: [IGc1 ] by SMART
  • Other resources with information on 5BXF
  • Community annotation for 5BXF at PDBWiki (http://pdbwiki.org)

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