5C08 Immune System date Jun 12, 2015
title 1e6 Tcr In Complex With Hla-A0e Carrying Rqwgpdpaav
authors P.J.Rizkallah, A.M.Bulek, D.K.Cole, A.K.Sewell
compound source
Molecule: Hla Class I Histocompatibility Antigen, A-2 Alpha
Chain: A, F
Fragment: Unp Residues 25-300
Synonym: Mhc Class I Antigen A2, Hla-A02 Heavy Chain
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hla-A, Hlaa
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Beta-2-Microglobulin
Chain: B, G
Fragment: Unp Residues 21-119
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: B2m, Cdabp0092, Hdcma22p
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Marker Peptide
Chain: C, H
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: 1e6 Tcr Alpha Chain
Chain: D, I
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: 1e6 Tcr Beta Chain
Chain: E, J
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.206 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.800 99.260 122.150 96.33 98.07 96.42
method X-Ray Diffractionresolution 2.33 Å
ligand EDO, GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, I


G, B
  • cellular response to iron io...

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  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (568 Kb) [Save to disk]
  • Biological Unit Coordinates (5c08.pdb1.gz) 282 Kb
  • Biological Unit Coordinates (5c08.pdb2.gz) 283 Kb
  • LPC: Ligand-Protein Contacts for 5C08
  • CSU: Contacts of Structural Units for 5C08
  • Structure Factors (4401 Kb)
  • Retrieve 5C08 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5C08 from S2C, [Save to disk]
  • Re-refined 5c08 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5c08_H] [5c08_C] [5c08_I] [5c08_A] [5c08_J] [5c08_G] [5c08_E] [5c08] [5c08_D] [5c08_B] [5c08_F]
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  • Domains found in 5C08: [IG_like] [IGc1] [IGv ] by SMART
    • Other resources with information on 5C08
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