5C11	Hydrolase	date	Jun 12, 2015
title	Crystal Structure Of Jarid1a Phd Finger Bound To Histone H3c Peptide
authors	J.Huang, H.Li
compound		source
Molecule: Lysine-Specific Demethylase 5a Chain: A Fragment: Phd Finger Domain, Unp Residues 1609-1659 Synonym: Histone Demethylase Jarid1a,Jumonjiarid Domain-Co Protein 1a,Retinoblastoma-Binding Protein 2,Rbbp-2; Ec: 1.14.11.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Kdm5a, Jarid1a, Rbbp2, Rbp2 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28b
Molecule: H3 Peptide Chain: B Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 Other_details: Chemically Synthesized H3 Peptide 1-10 With Modification
symmetry	Space Group: I 4 3 2	R_factor 0.246 R_Free 0.279
crystal cell	length a length b length c angle alpha angle beta angle gamma 108.910 108.910 108.910 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	4WQ, ZN	enzyme	Oxidoreductase E.C.1.14.11 BRENDA

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk] Biological Unit Coordinates (5c11.pdb1.gz) 10 Kb LPC: Ligand-Protein Contacts for 5C11 CSU: Contacts of Structural Units for 5C11 Structure Factors (44 Kb) Retrieve 5C11 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5C11 from S2C, [Save to disk] Re-refined 5c11 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5c11_A] [5c11] [5c11_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5C11: [PHD ] by SMART

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