5C6O Transport Protein date Jun 23, 2015
title Protein B
authors M.Lu
compound source
Molecule: Bh2163 Protein
Chain: A
Engineered: Yes
 Organism_scientific: Bacillus Halodurans (Strain Atcc Baa-1 18197 Ferm 7344 Jcm 9153 C-125);
Organism_taxid: 272558
Strain: Atcc Baa-125 Dsm 18197 Ferm 7344 Jcm 9153 C
Gene: Bh2163
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.270 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.059 94.146 102.464 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand 4YH enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • xenobiotic transmembrane tra...


    • Primary referenceStructural basis for the blockade of MATE multidrug efflux pumps., Radchenko M, Symersky J, Nie R, Lu M, Nat Commun. 2015 Aug 6;6:7995. doi: 10.1038/ncomms8995. PMID:26246409
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (5c6o.pdb1.gz) 147 Kb
  • LPC: Ligand-Protein Contacts for 5C6O
  • CSU: Contacts of Structural Units for 5C6O
  • Structure Factors (168 Kb)
  • Retrieve 5C6O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5C6O from S2C, [Save to disk]
  • Re-refined 5c6o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5C6O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5C6O
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5c6o] [5c6o_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5C6O
  • Community annotation for 5C6O at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science