5CTQ Immune System, Nuclear Protein, Rna Bind date Jul 24, 2015
title Crystal Structure Of Human Sart3tip110 Half-A Tpr (Hat) Dom
authors J.K.Park, E.E.Kim
compound source
Molecule: Squamous Cell Carcinoma Antigen Recognized By T-C
Chain: A, B, C, D
Fragment: Unp Residues 94-611
Synonym: Sart-3,Tat-Interacting Protein Of 110 Kda,Tip110,P Nuclear Rna-Binding Protein;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sart3, Kiaa0156, Tip110
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.235 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
120.912 80.529 146.641 90.00 99.36 90.00
method X-Ray Diffractionresolution 2.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (348 Kb) [Save to disk]
  • Biological Unit Coordinates (5ctq.pdb1.gz) 174 Kb
  • Biological Unit Coordinates (5ctq.pdb2.gz) 171 Kb
  • CSU: Contacts of Structural Units for 5CTQ
  • Structure Factors (1291 Kb)
  • Retrieve 5CTQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5CTQ from S2C, [Save to disk]
  • Re-refined 5ctq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5CTQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5CTQ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5ctq from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ctq_D] [5ctq_B] [5ctq_C] [5ctq_A] [5ctq]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5CTQ: [HAT ] by SMART
  • Other resources with information on 5CTQ
  • Community annotation for 5CTQ at PDBWiki (http://pdbwiki.org)

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