5CY2 Recombination Dna date Jul 30, 2015
title Tn3 Resolvase - Site III Complex Crystal Form II
authors P.S.Montano, P.A.Rice
compound source
Molecule: Transposon Tn3 Resolvase
Chain: A, B, E, F
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Tnpr
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Dna (27-Mer)
Chain: C, G
Engineered: Yes

Synthetic: Yes

Molecule: Dna (27-Mer)
Chain: D, H
Engineered: Yes

Synthetic: Yes
symmetry Space Group: C 1 2 1
R_factor 0.207 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
144.900 151.920 106.140 90.00 99.85 90.00
method X-Ray Diffractionresolution 4.00 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (475 Kb) [Save to disk]
  • Biological Unit Coordinates (5cy2.pdb1.gz) 234 Kb
  • Biological Unit Coordinates (5cy2.pdb2.gz) 235 Kb
  • CSU: Contacts of Structural Units for 5CY2
  • Structure Factors (276 Kb)
  • Retrieve 5CY2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5CY2 from S2C, [Save to disk]
  • Re-refined 5cy2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5CY2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5CY2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5cy2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5cy2_G] [5cy2_D] [5cy2_F] [5cy2_B] [5cy2] [5cy2_E] [5cy2_A] [5cy2_H] [5cy2_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5CY2
  • Community annotation for 5CY2 at PDBWiki (http://pdbwiki.org)

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