5D0T		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ALD, CL, MG	enzyme
Gene Ontology	Chain Function Process Component A, O proteasome core complex, alp... B, P proteasome core complex, alp... G, U proteasome core complex, alp... J, X endopeptidase activator acti... proteasome core complex, bet... K, V, H, Y L, Z Q, C R, D proteasome core complex, alp... S, E proteasome core complex, alp... T, F proteasome core complex, alp... W, I endopeptidase activator acti... proteasome core complex, bet... a, M proteasome core complex, bet... b, N proteasome core complex, bet...
Primary reference	A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome., Huber EM, Heinemeyer W, Li X, Arendt CS, Hochstrasser M, Groll M, Nat Commun. 2016 Mar 11;7:10900. doi: 10.1038/ncomms10900. PMID:26964885

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2064 Kb) [Save to disk] Biological Unit Coordinates (5d0t.pdb1.gz) 2050 Kb LPC: Ligand-Protein Contacts for 5D0T CSU: Contacts of Structural Units for 5D0T Structure Factors (5975 Kb) Retrieve 5D0T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5D0T from S2C, [Save to disk] Re-refined 5d0t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5D0T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5d0t_X] [5d0t_R] [5d0t] [5d0t_A] [5d0t_B] [5d0t_C] [5d0t_D] [5d0t_E] [5d0t_F] [5d0t_G] [5d0t_H] [5d0t_I] [5d0t_J] [5d0t_K] [5d0t_L] [5d0t_M] [5d0t_N] [5d0t_O] [5d0t_P] [5d0t_Q] [5d0t_S] [5d0t_T] [5d0t_U] [5d0t_V] [5d0t_W] [5d0t_Y] [5d0t_Z] [5d0t_a] [5d0t_b] SWISS-PROT database: Domain found in 5D0T: [Proteasome_A_N ] by SMART

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