5D0X		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BO2, CL, MG	enzyme
Gene Ontology	Chain Function Process Component B, P proteasome core complex, alp... C, Q E, S proteasome core complex, alp... F, T proteasome core complex, alp... H, Y, V, K L, Z N, b proteasome core complex, bet... O, A proteasome core complex, alp... R, D proteasome core complex, alp... U, G proteasome core complex, alp... W, I endopeptidase activator acti... proteasome core complex, bet... X, J endopeptidase activator acti... proteasome core complex, bet... a, M proteasome core complex, bet...
Primary reference	A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome., Huber EM, Heinemeyer W, Li X, Arendt CS, Hochstrasser M, Groll M, Nat Commun. 2016 Mar 11;7:10900. doi: 10.1038/ncomms10900. PMID:26964885

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2054 Kb) [Save to disk] Biological Unit Coordinates (5d0x.pdb1.gz) 2040 Kb LPC: Ligand-Protein Contacts for 5D0X CSU: Contacts of Structural Units for 5D0X Structure Factors (5950 Kb) Retrieve 5D0X in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5D0X from S2C, [Save to disk] Re-refined 5d0x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5D0X in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5d0x_I] [5d0x] [5d0x_A] [5d0x_B] [5d0x_C] [5d0x_D] [5d0x_E] [5d0x_F] [5d0x_G] [5d0x_H] [5d0x_J] [5d0x_K] [5d0x_L] [5d0x_M] [5d0x_N] [5d0x_O] [5d0x_P] [5d0x_Q] [5d0x_R] [5d0x_S] [5d0x_T] [5d0x_U] [5d0x_V] [5d0x_W] [5d0x_X] [5d0x_Y] [5d0x_Z] [5d0x_a] [5d0x_b] SWISS-PROT database: Domain found in 5D0X: [Proteasome_A_N ] by SMART

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