5D1C		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ACE, ALY, GOL, K, MCM, ZN	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Biochemical and Structural Characterization of HDAC8 Mutants Associated with Cornelia de Lange Syndrome Spectrum Disorders., Decroos C, Christianson NH, Gullett LE, Bowman CM, Christianson KE, Deardorff MA, Christianson DW, Biochemistry. 2015 Oct 27;54(42):6501-13. doi: 10.1021/acs.biochem.5b00881. Epub , 2015 Oct 14. PMID:26463496

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (262 Kb) [Save to disk] Biological Unit Coordinates (5d1c.pdb1.gz) 126 Kb Biological Unit Coordinates (5d1c.pdb2.gz) 130 Kb LPC: Ligand-Protein Contacts for 5D1C CSU: Contacts of Structural Units for 5D1C Structure Factors (2397 Kb) Retrieve 5D1C in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5D1C from S2C, [Save to disk] Re-refined 5d1c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5D1C in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5d1c] [5d1c_A] [5d1c_B] [5d1c_C] [5d1c_D] SWISS-PROT database:

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