5D4C | Transcription Dna | date | Aug 07, 2015 |
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title | Crystal Structure Of Thermus Thermophilus Product Complex Fo Transcription Initiation With Atp And Ctp | ||||||||||||||||||||||||||
authors | Y.Zhang, R.H.Ebright | ||||||||||||||||||||||||||
compound | source | ||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Alpha Chain: A, B, K, L Synonym: Rnap Subunit Alpha,Rna Polymerase Subunit Alpha, Transcriptase Subunit Alpha; Ec: 2.7.7.6 |
Organism_scientific: Thermus Thermophilus Organism_taxid: 274 | ||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Beta Chain: C, M Synonym: Rnap Subunit Beta,Rna Polymerase Subunit Beta,Tran Subunit Beta; Ec: 2.7.7.6 |
Organism_scientific: Thermus Thermophilus (Strain Hb8 Atc Dsm 579); Organism_taxid: 300852 Strain: Hb8 Atcc 27634 Dsm 579 | ||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Beta' Chain: D, N Synonym: Rnap Subunit Beta',Rna Polymerase Subunit Beta', Transcriptase Subunit Beta'; Ec: 2.7.7.6 |
Organism_scientific: Thermus Thermophilus (Strain Hb8 Atc Dsm 579); Organism_taxid: 300852 Strain: Hb8 Atcc 27634 Dsm 579 | ||||||||||||||||||||||||||
Molecule: Dna-Directed Rna Polymerase Subunit Omega Chain: E, O Synonym: Rnap Omega Subunit,Rna Polymerase Omega Subunit, Transcriptase Subunit Omega; Ec: 2.7.7.6 |
Organism_scientific: Thermus Thermophilus (Strain Hb8 Atc Dsm 579); Organism_taxid: 300852 Strain: Hb8 Atcc 27634 Dsm 579 | ||||||||||||||||||||||||||
Molecule: Rna Polymerase Sigma Factor Siga Chain: F, P Engineered: Yes |
Organism_scientific: Thermus Thermophilus (Strain Hb8 Atc Dsm 579); Organism_taxid: 300852 Strain: Hb8 Atcc 27634 Dsm 579 Gene: Siga, Ttha0532 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a | ||||||||||||||||||||||||||
Molecule: Dna (5'- D(Cpcptgpcpaptpcpcpgptpgpapgptpapgpapg)- Chain: G, R Engineered: Yes |
Synthetic: Yes Organism_scientific: Thermus Thermophilus Organism_taxid: 274 | ||||||||||||||||||||||||||
Molecule: Dna (27-Mer) Chain: H, S Engineered: Yes |
Synthetic: Yes Organism_scientific: Thermus Thermophilus Organism_taxid: 274 | ||||||||||||||||||||||||||
symmetry | Space Group: P 1 21 1 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 3.28 Å | ||||||||||||||||||||||||
ligand | ATP, C, CTP, MG, ZN | enzyme | Transferase E.C.2.7.7.6 BRENDA | ||||||||||||||||||||||||
Gene Ontology |
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Primary reference | The mechanism of RNA 5' capping with NAD+, NADH and desphospho-CoA., Bird JG, Zhang Y, Tian Y, Panova N, Barvik I, Greene L, Liu M, Buckley B, Krasny L, Lee JK, Kaplan CD, Ebright RH, Nickels BE, Nature. 2016 Jul 21;535(7612):444-7. PMID:27383794 |
Data retrieval |
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Visual 3D analysis of 5D4C |
Structure-derived information |
Sequence-derived information |
Other resources with information on 5D4C |
OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |