5D6V date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceThe function of the PduJ microcompartment shell protein is determined by the genomic position of its encoding gene., Chowdhury C, Chun S, Sawaya MR, Yeates TO, Bobik TA, Mol Microbiol. 2016 Sep;101(5):770-83. doi: 10.1111/mmi.13423. Epub 2016 Jun 7. PMID:27561553
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (5d6v.pdb1.gz) 150 Kb
  • CSU: Contacts of Structural Units for 5D6V
  • Structure Factors (267 Kb)
  • Retrieve 5D6V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5D6V from S2C, [Save to disk]
  • Re-refined 5d6v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5D6V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d6v] [5d6v_A]
  • SWISS-PROT database:
  • Domain found in 5D6V: [BMC ] by SMART

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