5DBI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NAD, XOG	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Structures of Iridoid Synthase from Cantharanthus roseus with Bound NAD(+) , NADPH, or NAD(+) /10-Oxogeranial: Reaction Mechanisms., Hu Y, Liu W, Malwal SR, Zheng Y, Feng X, Ko TP, Chen CC, Xu Z, Liu M, Han X, Gao J, Oldfield E, Guo RT, Angew Chem Int Ed Engl. 2015 Dec 14;54(51):15478-82. doi: 10.1002/anie.201508310., Epub 2015 Nov 13. PMID:26768532

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk] Biological Unit Coordinates (5dbi.pdb1.gz) 121 Kb Biological Unit Coordinates (5dbi.pdb2.gz) 122 Kb LPC: Ligand-Protein Contacts for 5DBI CSU: Contacts of Structural Units for 5DBI Structure Factors (381 Kb) Retrieve 5DBI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DBI from S2C, [Save to disk] Re-refined 5dbi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DBI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dbi] [5dbi_A] [5dbi_B] SWISS-PROT database:

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