5DCC		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	58U, EDO, GOL, PEG, PGE, SO4	enzyme
Gene	V735
Gene Ontology	Chain Function Process Component B, A peptidoglycan L,D-transpepti...
Primary reference	Structural insight into the inactivation of Mycobacterium tuberculosis non-classical transpeptidase LdtMt2 by biapenem and tebipenem., Bianchet MA, Pan YH, Basta LAB, Saavedra H, Lloyd EP, Kumar P, Mattoo R, Townsend CA, Lamichhane G, BMC Biochem. 2017 May 25;18(1):8. doi: 10.1186/s12858-017-0082-4. PMID:28545389

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (239 Kb) [Save to disk] Biological Unit Coordinates (5dcc.pdb1.gz) 117 Kb Biological Unit Coordinates (5dcc.pdb2.gz) 118 Kb LPC: Ligand-Protein Contacts for 5DCC CSU: Contacts of Structural Units for 5DCC Structure Factors (367 Kb) Retrieve 5DCC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DCC from S2C, [Save to disk] Re-refined 5dcc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DCC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dcc] [5dcc_A] [5dcc_B] SWISS-PROT database:

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