5DDP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GLN, MG, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, D


Primary referenceStructural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch., Ren A, Xue Y, Peselis A, Serganov A, Al-Hashimi HM, Patel DJ, Cell Rep. 2015 Dec 1;13(9):1800-13. doi: 10.1016/j.celrep.2015.10.062. Epub 2015 , Nov 19. PMID:26655897
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (5ddp.pdb1.gz) 46 Kb
  • Biological Unit Coordinates (5ddp.pdb2.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 5DDP
  • CSU: Contacts of Structural Units for 5DDP
  • Structure Factors (198 Kb)
  • Retrieve 5DDP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DDP from S2C, [Save to disk]
  • Re-refined 5ddp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DDP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ddp] [5ddp_A] [5ddp_B] [5ddp_C] [5ddp_D]
  • SWISS-PROT database:
  • Domain found in 5DDP: [RRM ] by SMART

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