5DDZ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insights into the interaction of the ribosomal P stalk protein P2 with a type II ribosome-inactivating protein ricin., Fan X, Zhu Y, Wang C, Niu L, Teng M, Li X, Sci Rep. 2016 Nov 25;6:37803. doi: 10.1038/srep37803. PMID:27886256
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (5ddz.pdb1.gz) 93 Kb
  • CSU: Contacts of Structural Units for 5DDZ
  • Structure Factors (940 Kb)
  • Retrieve 5DDZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DDZ from S2C, [Save to disk]
  • Re-refined 5ddz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DDZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ddz_A] [5ddz_B] [5ddz]
  • SWISS-PROT database:

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