5DEC		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component D, C, A, B
Primary reference	Catalytic mechanism and allosteric regulation of an oligomeric (p)ppGpp synthetase by an alarmone., Steinchen W, Schuhmacher JS, Altegoer F, Fage CD, Srinivasan V, Linne U, Marahiel MA, Bange G, Proc Natl Acad Sci U S A. 2015 Oct 27;112(43):13348-53. doi:, 10.1073/pnas.1505271112. Epub 2015 Oct 12. PMID:26460002

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (270 Kb) [Save to disk] Biological Unit Coordinates (5dec.pdb1.gz) 264 Kb CSU: Contacts of Structural Units for 5DEC Structure Factors (1109 Kb) Retrieve 5DEC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DEC from S2C, [Save to disk] Re-refined 5dec structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DEC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dec] [5dec_A] [5dec_B] [5dec_C] [5dec_D] SWISS-PROT database: Domain found in 5DEC: [RelA_SpoT ] by SMART

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