5DI5	De Novo Protein	date	Aug 31, 2015
title	Beta1 T801 Loop Variant In P3221
authors	J.T.Macdonald, B.V.Kabasakal, J.W.Murray
compound		source
Molecule: Beta1 T801 Loop Variant Chain: A Engineered: Yes		Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: Gold Expression_system_vector_type: Plasmid Expression_system_plasmid: Prseta-Thr
symmetry	Space Group: P 32 2 1	R_factor 0.178 R_Free 0.188
crystal cell	length a length b length c angle alpha angle beta angle gamma 123.460 123.460 47.830 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.28 Å

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (5di5.pdb1.gz) 115 Kb CSU: Contacts of Structural Units for 5DI5 Structure Factors (329 Kb) Retrieve 5DI5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DI5 from S2C, [Save to disk] Re-refined 5di5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DI5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5DI5

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5di5_A] [5di5] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5DI5

Community annotation for 5DI5 at PDBWiki (http://pdbwiki.org)

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