5DK4		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5BX, ATP, GOL, MG, MSE	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Selective Inhibition of Bacterial Tryptophanyl-tRNA Synthetases by Indolmycin is Mechanism-Based., Williams TL, Yin WY, Carter CW Jr, J Biol Chem. 2015 Nov 9. pii: jbc.M115.690321. PMID:26555258

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (116 Kb) [Save to disk] Biological Unit Coordinates (5dk4.pdb1.gz) 217 Kb LPC: Ligand-Protein Contacts for 5DK4 CSU: Contacts of Structural Units for 5DK4 Structure Factors (1941 Kb) Retrieve 5DK4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DK4 from S2C, [Save to disk] Re-refined 5dk4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DK4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dk4] [5dk4_A] SWISS-PROT database:

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