5DKI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5BZ, CL, MG	enzyme
Gene Ontology	Chain Function Process Component E, S proteasome core complex, alp... F, T proteasome core complex, alp... K, H, V, Y L, Z M, a proteasome core complex, bet... N, b proteasome core complex, bet... O, A proteasome core complex, alp... P, B proteasome core complex, alp... Q, C R, D proteasome core complex, alp... U, G proteasome core complex, alp... W, I endopeptidase activator acti... proteasome core complex, bet... X, J endopeptidase activator acti... proteasome core complex, bet...
Primary reference	Targeted Delivery of Proteasome Inhibitors to Somatostatin-Receptor-Expressing Cancer Cells by Octreotide Conjugation., Beck P, Cui H, Hegemann JD, Marahiel MA, Kruger A, Groll M, ChemMedChem. 2015 Dec;10(12):1969-73. doi: 10.1002/cmdc.201500449. Epub 2015 Oct , 16. PMID:26471124

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2042 Kb) [Save to disk] Biological Unit Coordinates (5dki.pdb1.gz) 2028 Kb LPC: Ligand-Protein Contacts for 5DKI CSU: Contacts of Structural Units for 5DKI Structure Factors (4811 Kb) Retrieve 5DKI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DKI from S2C, [Save to disk] Re-refined 5dki structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DKI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dki_R] [5dki_B] [5dki_A] [5dki_C] [5dki_D] [5dki_N] [5dki_E] [5dki_F] [5dki_O] [5dki_G] [5dki_H] [5dki_I] [5dki_J] [5dki_P] [5dki_K] [5dki_L] [5dki_M] [5dki_Q] [5dki] [5dki_S] [5dki_T] [5dki_U] [5dki_V] [5dki_W] [5dki_X] [5dki_Y] [5dki_Z] [5dki_a] [5dki_b] SWISS-PROT database: Domain found in 5DKI: [Proteasome_A_N ] by SMART

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