5DKR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5CZ, CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • kinase inhibitor activity


  • Primary referenceSmall Molecule Inhibitors of Ca-S100B Reveal Two Protein Conformations., Cavalier MC, Ansari MI, Pierce AD, Wilder PT, McKnight LE, Raman EP, Neau DB, Bezawada P, Alasady MJ, Charpentier TH, Varney KM, Toth EA, MacKerell AD Jr, Coop A, Weber DJ, J Med Chem. 2016 Jan 13. PMID:26727270
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (5dkr.pdb1.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 5DKR
  • CSU: Contacts of Structural Units for 5DKR
  • Structure Factors (350 Kb)
  • Retrieve 5DKR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DKR from S2C, [Save to disk]
  • Re-refined 5dkr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DKR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dkr] [5dkr_A] [5dkr_B]
  • SWISS-PROT database:
  • Domain found in 5DKR: [S_100 ] by SMART

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