5DO2 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG enzyme
Primary referenceA humanized neutralizing antibody against MERS-CoV targeting the receptor-binding domain of the spike protein., Li Y, Wan Y, Liu P, Zhao J, Lu G, Qi J, Wang Q, Lu X, Wu Y, Liu W, Zhang B, Yuen KY, Perlman S, Gao GF, Yan J, Cell Res. 2015 Sep 22. doi: 10.1038/cr.2015.113. PMID:26391698
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (422 Kb) [Save to disk]
  • Biological Unit Coordinates (5do2.pdb1.gz) 210 Kb
  • Biological Unit Coordinates (5do2.pdb2.gz) 207 Kb
  • LPC: Ligand-Protein Contacts for 5DO2
  • CSU: Contacts of Structural Units for 5DO2
  • Structure Factors (830 Kb)
  • Retrieve 5DO2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DO2 from S2C, [Save to disk]
  • Re-refined 5do2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DO2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5do2] [5do2_A] [5do2_B] [5do2_C] [5do2_D] [5do2_H] [5do2_L]
  • SWISS-PROT database:
  • Domains found in 5DO2: [IG_like] [IGv ] by SMART

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