5DPF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5H9, CA, DMS, GOL, ZN	enzyme
Gene Ontology	Chain Function Process Component E
Primary reference	Thermodynamics of protein-ligand interactions as a reference for computational analysis: how to assess accuracy, reliability and relevance of experimental data., Krimmer SG, Klebe G, J Comput Aided Mol Des. 2015 Sep;29(9):867-83. doi: 10.1007/s10822-015-9867-y., Epub 2015 Sep 16. PMID:26376645

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk] Biological Unit Coordinates (5dpf.pdb1.gz) 159 Kb LPC: Ligand-Protein Contacts for 5DPF CSU: Contacts of Structural Units for 5DPF Structure Factors (563 Kb) Retrieve 5DPF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5DPF from S2C, [Save to disk] Re-refined 5dpf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5DPF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5dpf] [5dpf_E] SWISS-PROT database:

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